STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG23444.1Histidine ammonia-lyase. (503 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutI
Imidazolonepropionase.
 
  
 0.997
EHG23442.1
Hypothetical protein.
 
  
 0.874
EHG22607.1
Hypothetical protein.
  
 
 0.557
EHG23211.1
Hypothetical protein.
    
 0.485
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 
 0.464
EHG22451.1
Hypothetical protein.
   
 
  0.424
EHG23212.1
Hypothetical protein.
     
 0.420
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.