STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG23215.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
msrA
Hypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.984
EHG24625.1
Dihydrolipoyl dehydrogenase.
   
 0.823
EHG22900.1
Hypothetical protein.
 
 
 0.807
EHG23090.1
Hypothetical protein.
  
 
 0.737
EHG24641.1
Thioredoxin-disulfide reductase.
   
 0.680
EHG23774.1
Hypothetical protein.
  
  
 0.673
EHG23725.1
Hypothetical protein; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 
 0.605
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.586
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
   0.544
EHG23219.1
Exodeoxyribonuclease.
   
   0.537
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.