STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG22808.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
EHG22809.1
Hypothetical protein.
       0.760
EHG22812.1
Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
 
     0.618
EHG22811.1
Hypothetical protein.
 
     0.610
EHG22810.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
       0.561
EHG22526.1
Hypothetical protein.
  
  
 0.475
EHG22454.1
Hypothetical protein.
  
  
 0.475
EHG22813.1
Hypothetical protein; Belongs to the DapB family.
  
    0.405
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.