node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHG22526.1 | EHG22528.1 | HMPREF9332_01331 | HMPREF9332_01333 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EHG22526.1 | rbfA | HMPREF9332_01331 | HMPREF9332_01332 | Hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.800 |
EHG22528.1 | EHG22526.1 | HMPREF9332_01333 | HMPREF9332_01331 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EHG22528.1 | rbfA | HMPREF9332_01333 | HMPREF9332_01332 | Hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.804 |
rbfA | EHG22526.1 | HMPREF9332_01332 | HMPREF9332_01331 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein. | 0.800 |
rbfA | EHG22528.1 | HMPREF9332_01332 | HMPREF9332_01333 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Hypothetical protein. | 0.804 |
rbfA | rimP | HMPREF9332_01332 | HMPREF9332_01554 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.770 |
rbfA | rpsB | HMPREF9332_01332 | HMPREF9332_01676 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.754 |
rbfA | rpsC | HMPREF9332_01332 | HMPREF9332_01872 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.756 |
rbfA | rpsD | HMPREF9332_01332 | HMPREF9332_01891 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.828 |
rbfA | rpsE | HMPREF9332_01332 | HMPREF9332_01883 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.832 |
rbfA | rpsO | HMPREF9332_01332 | HMPREF9332_01370 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.848 |
rbfA | rpsQ | HMPREF9332_01332 | HMPREF9332_01875 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.839 |
rbfA | truB | HMPREF9332_01332 | HMPREF9332_01375 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.944 |
rimP | rbfA | HMPREF9332_01554 | HMPREF9332_01332 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.770 |
rimP | rpsB | HMPREF9332_01554 | HMPREF9332_01676 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.802 |
rimP | rpsC | HMPREF9332_01554 | HMPREF9332_01872 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.736 |
rimP | rpsD | HMPREF9332_01554 | HMPREF9332_01891 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.691 |
rimP | rpsE | HMPREF9332_01554 | HMPREF9332_01883 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.646 |
rimP | rpsO | HMPREF9332_01554 | HMPREF9332_01370 | Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.701 |