STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG21232.1Hypothetical protein; Belongs to the peptidase S41A family. (592 aa)    
Predicted Functional Partners:
EHG21233.1
Hypothetical protein.
       0.825
EHG21230.1
Hypothetical protein.
       0.794
EHG21231.1
Hypothetical protein.
       0.794
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.774
EHG21234.1
Hypothetical protein.
  
    0.724
EHG21235.1
Hypothetical protein.
       0.639
EHG21228.1
Hypothetical protein.
   
   0.549
EHG22084.1
Pyruvate:ferredoxin oxidoreductase.
    
   0.455
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.