Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG20391.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
EHG20392.1
Transposase.
     0.945
EHG24235.1
Hypothetical protein.
  
     0.769
EHG20383.1
Hypothetical protein.
 
     0.768
EHG23033.1
Transposase.
 
     0.763
EHG20380.1
Transposase.
 
     0.759
EHG23236.1
Transposase.
 
     0.736
EHG23407.1
Hypothetical protein.
 
     0.726
EHG25069.1
Hypothetical protein.
 
     0.724
EHG24889.1
Hypothetical protein.
 
     0.724
EHG22411.1
Hypothetical protein.
 
     0.724
Your Current Organism:
Alloprevotella rava
NCBI taxonomy Id: 679199
Other names: A. rava F0323, Alloprevotella rava F0323, Prevotella sp. oral taxon 302 str. F0323
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