STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56657.1Hypothetical protein; Belongs to the bacterial solute-binding protein 9 family. (311 aa)    
Predicted Functional Partners:
EHI56656.1
Hypothetical protein.
 
 
 0.997
EHI56655.1
Hypothetical protein.
 
 0.977
EHI56654.1
Hypothetical protein.
 
 0.961
EHI55747.1
Hypothetical protein.
 
 0.916
EHI55748.1
Hypothetical protein.
 
 
 0.883
EHI55749.1
Hypothetical protein.
  
   
 0.612
EHI56535.1
Hypothetical protein.
  
  
 0.594
EHI54951.1
Hypothetical protein.
  
 
 0.545
rpsZ
30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.489
EHI56513.1
Phosphoribosylformylglycinamidine synthase.
     
 0.489
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.