STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56754.1Hypothetical protein; Belongs to the CoA-transferase III family. (409 aa)    
Predicted Functional Partners:
EHI56755.1
Hypothetical protein.
 
     0.908
EHI56757.1
Hypothetical protein.
 
     0.877
EHI56756.1
Hypothetical protein.
 
   
 0.873
EHI55729.1
Pyruvate:ferredoxin oxidoreductase.
    
  0.792
EHI54960.1
Pyruvate:ferredoxin oxidoreductase.
    
  0.792
accD
Hypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
    
 0.722
EHI56749.1
Hypothetical protein.
 
 0.663
EHI56750.1
Hypothetical protein.
 
   
 0.660
EHI56758.1
Hypothetical protein.
 
   
 0.543
EHI55725.1
Hypothetical protein.
 
 0.483
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.