STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56557.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
EHI56555.1
Csm4 family CRISPR-associated ramp protein.
  
 
 0.992
EHI56556.1
Csm3 family CRISPR-associated ramp protein.
  
 
 0.992
EHI56554.1
Csm5 family CRISPR-associated ramp protein.
  
 
 0.989
EHI56558.1
Hypothetical protein.
  
 
 0.980
EHI56559.1
Hypothetical protein.
  
 
 0.978
EHI56560.1
CRISPR-associated protein cas6.
     
 0.790
EHI56778.1
Hypothetical protein.
  
  
 0.490
EHI56561.1
Hypothetical protein.
       0.433
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.