STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56484.1Hypothetical protein. (385 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.919
EHI56483.1
Hypothetical protein; Belongs to the membrane-bound acyltransferase family.
       0.773
EHI56481.1
Mannose-6-phosphate isomerase.
       0.760
EHI56482.1
Hypothetical protein.
       0.760
EHI56485.1
Hypothetical protein.
  
    0.729
EHI56480.1
Hypothetical protein.
  
  
 0.594
EHI56488.1
Hypothetical protein.
  
    0.527
EHI56487.1
Hypothetical protein.
       0.520
EHI56486.1
Hypothetical protein.
  
    0.519
EHI56489.1
Hypothetical protein.
  
    0.503
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.