STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56320.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
EHI54698.1
Hypothetical protein.
  
     0.585
EHI55233.1
Hypothetical protein.
  
     0.567
EHI56426.1
Hypothetical protein.
  
     0.512
EHI56312.1
Hypothetical protein.
 
     0.499
EHI56321.1
Hypothetical protein.
       0.497
EHI56322.1
Hypothetical protein.
       0.497
EHI54697.1
Hypothetical protein.
  
     0.489
EHI56318.1
Hypothetical protein.
       0.486
EHI56319.1
Hypothetical protein.
       0.486
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.462
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.