STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI56174.1Hypothetical protein. (463 aa)    
Predicted Functional Partners:
EHI56176.1
Hypothetical protein.
 
  
 0.948
EHI56175.1
Hypothetical protein.
 
   0.912
EHI55891.1
Hypothetical protein.
  
 0.844
EHI55892.1
Hypothetical protein.
  
 0.844
EHI56291.1
Hypothetical protein.
 
     0.688
EHI55092.1
Hypothetical protein.
 
 
 0.589
EHI55350.1
Hypothetical protein.
 
   0.583
EHI55090.1
Hypothetical protein.
 
   0.555
EHI55352.1
Hypothetical protein.
 
  
 0.538
EHI56289.1
Hypothetical protein.
 
   0.527
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.