STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55846.1D-proline reductase proprotein prdA. (641 aa)    
Predicted Functional Partners:
EHI55844.1
Hypothetical protein.
  
 0.956
EHI54677.1
Hypothetical protein.
  
 0.914
EHI55845.1
Hypothetical protein.
 
     0.888
EHI55843.1
Hypothetical protein.
 
     0.878
EHI55847.1
Hypothetical protein.
 
   
 0.868
EHI55840.1
Proline racemase; Belongs to the proline racemase family.
 
  
 0.814
EHI55839.1
Hypothetical protein.
 
     0.811
EHI54674.1
Hypothetical protein.
 
   
 0.776
EHI55842.1
Hypothetical protein.
 
  
 
0.539
EHI54678.1
Hypothetical protein.
 
  
 
0.480
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.