STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55795.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
EHI54929.1
Hypothetical protein.
 
  0.863
EHI55425.1
Hypothetical protein.
 
  0.768
EHI55498.1
Hypothetical protein.
 
 
  0.752
EHI55497.1
Hypothetical protein.
 
     0.747
EHI54927.1
Hypothetical protein.
 
 
 0.710
EHI55424.1
Hypothetical protein.
  
 
  0.645
EHI55356.1
Hypothetical protein.
 
    0.634
EHI54692.1
Hypothetical protein.
 
 
  0.592
EHI55925.1
Hypothetical protein.
 
    0.574
EHI55499.1
Hypothetical protein.
  
 
 0.553
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.