STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55601.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
EHI55600.1
Hypothetical protein.
       0.763
EHI55609.1
Flp pilus assembly protein CpaB.
  
  
 0.741
EHI55599.1
Hypothetical protein.
       0.731
EHI55605.1
Hypothetical protein.
  
    0.714
EHI55606.1
Hypothetical protein.
  
  
 0.707
EHI55603.1
Hypothetical protein.
  
    0.642
EHI55602.1
Hypothetical protein.
       0.639
EHI55607.1
Hypothetical protein.
  
    0.584
EHI55604.1
Hypothetical protein.
       0.579
EHI55598.1
Hypothetical protein.
       0.528
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.