STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55604.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
EHI55605.1
Hypothetical protein.
 
     0.936
EHI55606.1
Hypothetical protein.
 
     0.908
EHI55607.1
Hypothetical protein.
 
     0.833
EHI55608.1
Hypothetical protein.
 
     0.808
EHI55609.1
Flp pilus assembly protein CpaB.
 
     0.799
EHI55603.1
Hypothetical protein.
       0.712
EHI55602.1
Hypothetical protein.
       0.687
EHI55226.1
Hypothetical protein.
 
     0.634
EHI55601.1
Hypothetical protein.
       0.579
EHI55600.1
Hypothetical protein.
       0.550
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.