STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55401.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EHI55542.1
Hypothetical protein.
  
     0.522
EHI55061.1
Hypothetical protein.
  
     0.502
EHI55250.1
Hypothetical protein.
  
     0.475
EHI55060.1
Hypothetical protein.
  
     0.447
EHI56290.1
Hypothetical protein.
  
     0.416
EHI56296.1
Hypothetical protein.
  
     0.415
EHI55019.1
Hypothetical protein.
  
     0.411
EHI55018.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.