STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55201.1Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (623 aa)    
Predicted Functional Partners:
EHI55202.1
Hypothetical protein.
       0.839
EHI55203.1
Hypothetical protein.
  
    0.813
EHI55200.1
Hypothetical protein.
       0.727
EHI55196.1
Hypothetical protein.
       0.515
EHI55197.1
Hypothetical protein.
       0.515
EHI55198.1
Hypothetical protein.
       0.515
EHI55199.1
Hypothetical protein.
       0.515
EHI55981.1
Hypothetical protein.
  
  
 0.478
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
   
 0.468
EHI55179.1
Hypothetical protein.
   
    0.452
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.