STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55226.1Hypothetical protein. (411 aa)    
Predicted Functional Partners:
EHI55225.1
Hypothetical protein.
 
  
 0.978
EHI55224.1
Hypothetical protein.
 
  
 0.922
EHI55605.1
Hypothetical protein.
 
  
 0.893
EHI55606.1
Hypothetical protein.
 
  
 0.879
EHI55228.1
Hypothetical protein.
 
     0.820
EHI55227.1
Hypothetical protein.
     
 0.797
EHI55609.1
Flp pilus assembly protein CpaB.
 
  
 0.742
EHI55608.1
Hypothetical protein.
  
 0.717
EHI55604.1
Hypothetical protein.
 
     0.634
EHI55222.1
Hypothetical protein.
 
     0.552
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.