Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHI55237.1 | EHI55239.1 | HMPREF9333_01652 | HMPREF9333_01654 | Hypothetical protein. | Hypothetical protein. | 0.698 |
EHI55237.1 | EHI55240.1 | HMPREF9333_01652 | HMPREF9333_01655 | Hypothetical protein. | Hypothetical protein. | 0.592 |
EHI55237.1 | metG | HMPREF9333_01652 | HMPREF9333_01656 | Hypothetical protein. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.590 |
EHI55237.1 | rsmA | HMPREF9333_01652 | HMPREF9333_01653 | Hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.687 |
EHI55239.1 | EHI55237.1 | HMPREF9333_01654 | HMPREF9333_01652 | Hypothetical protein. | Hypothetical protein. | 0.698 |
EHI55239.1 | EHI55240.1 | HMPREF9333_01654 | HMPREF9333_01655 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EHI55239.1 | metG | HMPREF9333_01654 | HMPREF9333_01656 | Hypothetical protein. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.850 |
EHI55239.1 | rsmA | HMPREF9333_01654 | HMPREF9333_01653 | Hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.948 |
EHI55240.1 | EHI55237.1 | HMPREF9333_01655 | HMPREF9333_01652 | Hypothetical protein. | Hypothetical protein. | 0.592 |
EHI55240.1 | EHI55239.1 | HMPREF9333_01655 | HMPREF9333_01654 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EHI55240.1 | metG | HMPREF9333_01655 | HMPREF9333_01656 | Hypothetical protein. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.522 |
EHI55240.1 | rsmA | HMPREF9333_01655 | HMPREF9333_01653 | Hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.689 |
metG | EHI55237.1 | HMPREF9333_01656 | HMPREF9333_01652 | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Hypothetical protein. | 0.590 |
metG | EHI55239.1 | HMPREF9333_01656 | HMPREF9333_01654 | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Hypothetical protein. | 0.850 |
metG | EHI55240.1 | HMPREF9333_01656 | HMPREF9333_01655 | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Hypothetical protein. | 0.522 |
metG | rsmA | HMPREF9333_01656 | HMPREF9333_01653 | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.784 |
rsmA | EHI55237.1 | HMPREF9333_01653 | HMPREF9333_01652 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Hypothetical protein. | 0.687 |
rsmA | EHI55239.1 | HMPREF9333_01653 | HMPREF9333_01654 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Hypothetical protein. | 0.948 |
rsmA | EHI55240.1 | HMPREF9333_01653 | HMPREF9333_01655 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Hypothetical protein. | 0.689 |
rsmA | metG | HMPREF9333_01653 | HMPREF9333_01656 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Hypothetical protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.784 |