STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI55114.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
EHI54960.1
Pyruvate:ferredoxin oxidoreductase.
    
 0.952
EHI55729.1
Pyruvate:ferredoxin oxidoreductase.
    
 0.888
EHI55115.1
Hypothetical protein.
 
    0.748
EHI55431.1
Hypothetical protein.
  
 
  0.647
EHI55112.1
Hypothetical protein.
  
  
 0.515
EHI55116.1
Hypothetical protein.
  
 
 0.486
EHI56121.1
Hypothetical protein.
  
  
0.473
EHI55113.1
Hypothetical protein.
       0.450
EHI55038.1
Hypothetical protein; Belongs to the NAD synthetase family.
  
 0.448
EHI55832.1
Hypothetical protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
    0.426
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.