Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHI54975.1 | EHI54976.1 | HMPREF9333_01822 | HMPREF9333_01823 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EHI54975.1 | EHI54977.1 | HMPREF9333_01822 | HMPREF9333_01824 | Hypothetical protein. | Hypothetical protein. | 0.801 |
EHI54975.1 | EHI54978.1 | HMPREF9333_01822 | HMPREF9333_01825 | Hypothetical protein. | Hypothetical protein. | 0.678 |
EHI54975.1 | EHI54981.1 | HMPREF9333_01822 | HMPREF9333_01828 | Hypothetical protein. | Hypothetical protein. | 0.508 |
EHI54975.1 | purE | HMPREF9333_01822 | HMPREF9333_01821 | Hypothetical protein. | AIR carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.647 |
EHI54975.1 | purM | HMPREF9333_01822 | HMPREF9333_01820 | Hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.522 |
EHI54975.1 | purN | HMPREF9333_01822 | HMPREF9333_01819 | Hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.522 |
EHI54975.1 | pyrD | HMPREF9333_01822 | HMPREF9333_01827 | Hypothetical protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.534 |
EHI54975.1 | pyrE | HMPREF9333_01822 | HMPREF9333_01826 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.692 |
EHI54975.1 | pyrF | HMPREF9333_01822 | HMPREF9333_01829 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.537 |
EHI54976.1 | EHI54975.1 | HMPREF9333_01823 | HMPREF9333_01822 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EHI54976.1 | EHI54977.1 | HMPREF9333_01823 | HMPREF9333_01824 | Hypothetical protein. | Hypothetical protein. | 0.683 |
EHI54976.1 | EHI54978.1 | HMPREF9333_01823 | HMPREF9333_01825 | Hypothetical protein. | Hypothetical protein. | 0.678 |
EHI54976.1 | EHI54981.1 | HMPREF9333_01823 | HMPREF9333_01828 | Hypothetical protein. | Hypothetical protein. | 0.500 |
EHI54976.1 | purE | HMPREF9333_01823 | HMPREF9333_01821 | Hypothetical protein. | AIR carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.511 |
EHI54976.1 | purM | HMPREF9333_01823 | HMPREF9333_01820 | Hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.481 |
EHI54976.1 | purN | HMPREF9333_01823 | HMPREF9333_01819 | Hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.481 |
EHI54976.1 | pyrD | HMPREF9333_01823 | HMPREF9333_01827 | Hypothetical protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. | 0.507 |
EHI54976.1 | pyrE | HMPREF9333_01823 | HMPREF9333_01826 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.509 |
EHI54976.1 | pyrF | HMPREF9333_01823 | HMPREF9333_01829 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.506 |
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