STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54884.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
EHI54885.1
Hypothetical protein.
 
  0.980
EHI54883.1
Hypothetical protein.
 
     0.908
EHI54689.1
Hypothetical protein.
 
    
0.841
EHI54886.1
Hypothetical protein.
       0.773
ecfA
Hypothetical protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.766
EHI55871.1
Hypothetical protein.
 
  0.759
EHI56180.1
Hypothetical protein.
 
   
0.754
EHI54928.1
Hypothetical protein.
 
    
0.629
EHI56446.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.529
EHI55774.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
   
 
0.522
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.