STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54913.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
EHI54914.1
Hypothetical protein.
 
   
 0.954
EHI54915.1
Hypothetical protein.
 
     0.945
EHI54912.1
Hypothetical protein.
 
   
 0.918
EHI54918.1
Hypothetical protein.
 
    0.834
EHI54911.1
Hypothetical protein.
 
     0.831
EHI54920.1
Hypothetical protein.
 
  
 0.803
EHI54919.1
Hypothetical protein.
 
     0.781
EHI54916.1
Hypothetical protein.
 
 
   0.764
EHI54921.1
Hypothetical protein.
 
     0.656
EHI54917.1
Hypothetical protein.
       0.651
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.