STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54928.1Hypothetical protein. (253 aa)    
Predicted Functional Partners:
EHI54929.1
Hypothetical protein.
 
  0.981
EHI55425.1
Hypothetical protein.
 
  0.950
EHI54927.1
Hypothetical protein.
 
 
 0.939
EHI55416.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
     
0.899
EHI55498.1
Hypothetical protein.
 
  0.868
EHI54655.1
Hypothetical protein.
 
     
0.827
EHI56176.1
Hypothetical protein.
 
      0.810
EHI55346.1
Hypothetical protein.
 
    
0.798
EHI55424.1
Hypothetical protein.
 
 
  0.788
EHI54692.1
Hypothetical protein.
 
 
  0.719
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.