STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54772.1Hypothetical protein. (3711 aa)    
Predicted Functional Partners:
EHI54795.1
Hypothetical protein.
  
 
 0.921
EHI54774.1
Hypothetical protein.
 
     0.874
EHI54862.1
Hypothetical protein.
 
     0.747
EHI54773.1
Hypothetical protein.
       0.746
EHI54775.1
Hypothetical protein.
       0.737
EHI56811.1
Hypothetical protein.
  
     0.726
EHI56800.1
Hypothetical protein.
 
     0.724
EHI54937.1
Hypothetical protein.
  
     0.704
EHI54769.1
Hypothetical protein.
 
     0.683
EHI54860.1
Hypothetical protein.
 
     0.679
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.