STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54708.1Hypothetical protein. (574 aa)    
Predicted Functional Partners:
EHI54710.1
Hypothetical protein.
 
     0.880
EHI55538.1
Hypothetical protein.
 
     
0.877
EHI54709.1
Hypothetical protein.
 
    
0.817
EHI54633.1
Hypothetical protein.
     0.775
EHI54754.1
Hypothetical protein.
 
    0.770
EHI54664.1
Hypothetical protein.
 
    0.768
EHI55871.1
Hypothetical protein.
  
  0.727
EHI54634.1
Hypothetical protein.
  
     0.709
EHI54928.1
Hypothetical protein.
 
     
0.688
EHI54535.1
Hypothetical protein.
 
  
  0.658
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.