STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54682.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
EHI54681.1
Hypothetical protein.
  
 0.967
msrB
Hypothetical protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.917
EHI54703.1
Alkyl hydroperoxide reductase F subunit.
 
  
 0.578
EHI55380.1
Hypothetical protein.
 
  
 0.490
EHI56760.1
Hypothetical protein.
     
 0.484
EHI55372.1
Hypothetical protein.
 
   
 0.483
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
       0.445
carA
Carbamoyl-phosphate synthase; Belongs to the CarA family.
       0.445
EHI55740.1
Hypothetical protein.
  
    0.436
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.