STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54689.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
EHI55425.1
Hypothetical protein.
 
  0.919
EHI54929.1
Hypothetical protein.
 
  0.914
EHI55408.1
Hypothetical protein.
 
    
0.905
EHI55416.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
     
0.900
EHI56176.1
Hypothetical protein.
 
      0.899
EHI54688.1
Hypothetical protein.
 
     0.889
EHI55872.1
Hypothetical protein.
 
    
0.869
EHI54692.1
Hypothetical protein.
 
 
  0.851
EHI54884.1
Hypothetical protein.
 
    
0.841
EHI54927.1
Hypothetical protein.
 
 
 0.817
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.