STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54642.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
EHI55879.1
Hypothetical protein.
 
     
0.861
EHI54644.1
Hypothetical protein.
 
     0.852
EHI54645.1
Hypothetical protein.
 
     0.835
EHI54641.1
Hypothetical protein.
 
    
0.820
EHI54643.1
Hypothetical protein.
   
 
0.787
EHI55538.1
Hypothetical protein.
 
     
0.713
metN
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.669
EHI55157.1
Hypothetical protein.
 
     
0.635
EHI54646.1
Hypothetical protein.
 
     0.624
EHI55519.1
Hypothetical protein.
  
    0.585
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.