STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI54626.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EHI54627.1
Hypothetical protein.
  0.971
EHI54629.1
Hypothetical protein.
 
  
  0.933
EHI54628.1
Hypothetical protein.
 
  
  0.932
EHI54625.1
Hypothetical protein.
 
     0.923
EHI55663.1
Hypothetical protein.
  0.870
EHI54630.1
Hypothetical protein.
 
     0.869
EHI55505.1
Hypothetical protein.
  0.863
EHI55490.1
Hypothetical protein.
  0.851
EHI54643.1
Hypothetical protein.
  0.839
EHI54740.1
Hypothetical protein.
  0.819
Your Current Organism:
Johnsonella ignava
NCBI taxonomy Id: 679200
Other names: J. ignava ATCC 51276, Johnsonella ignava ATCC 51276, Johnsonella ignava str. ATCC 51276, Johnsonella ignava strain ATCC 51276
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