Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG22295.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EHG22296.1
Hypothetical protein.
       0.797
EHG22298.1
Hypothetical protein.
       0.796
EHG22297.1
Hypothetical protein.
       0.791
EHG22294.1
Hypothetical protein.
       0.776
EHG22293.1
Hypothetical protein.
       0.727
EHG22292.1
Hypothetical protein.
       0.680
EHG22290.1
Hypothetical protein.
       0.645
EHG22291.1
Hypothetical protein.
       0.645
EHG22287.1
Hypothetical protein.
       0.594
EHG22288.1
Hypothetical protein.
       0.594
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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