STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG21810.1Hypothetical protein; Belongs to the FtsK/SpoIIIE/SftA family. (620 aa)    
Predicted Functional Partners:
EHG21809.1
Hypothetical protein; Belongs to the FtsK/SpoIIIE/SftA family.
     0.994
EHG20825.1
Hypothetical protein; Essential cell division protein.
   
 
 0.706
EHG21556.1
Hypothetical protein; Belongs to the ParB family.
  
  
 0.687
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
  
 0.650
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
 
   
 0.636
EHG18974.1
Hypothetical protein.
  
 
 0.628
EHG22707.1
Hypothetical protein.
    
   0.627
EHG21675.1
Hypothetical protein.
    
   0.627
EHG21317.1
Hypothetical protein.
    
   0.627
EHG21451.1
Hypothetical protein.
    
   0.627
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.