Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG21845.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
EHG21844.1
Hypothetical protein.
     0.936
EHG21846.1
Hypothetical protein.
 
    
0.849
EHG21847.1
UTP-glucose-1-phosphate uridylyltransferase.
       0.770
EHG19573.1
Hypothetical protein.
  
     0.584
EHG21848.1
Tartrate dehydrogenase.
       0.559
EHG21849.1
Hypothetical protein.
       0.496
EHG20801.1
Hypothetical protein.
  
     0.496
EHG21850.1
Hypothetical protein.
       0.418
EHG21851.1
Hypothetical protein; Belongs to the CinA family.
       0.418
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.418
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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