Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG20756.1ABC transporter. (548 aa)    
Predicted Functional Partners:
EHG20757.1
ABC transporter.
 
  
 
0.980
EHG20755.1
Cytochrome d ubiquinol oxidase.
 
     0.966
EHG20754.1
Hypothetical protein.
 
     0.965
EHG18888.1
Glutamine transport ATP-binding protein glnQ.
 
   
 
0.916
metN-2
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.843
metN
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.813
EHG20758.1
Hypothetical protein.
       0.776
EHG20889.1
Hypothetical protein.
  
 
 0.591
EHG20621.1
Lipid A export permease/ATP-binding protein MsbA.
  
 0.536
EHG20753.1
Hypothetical protein.
   
   0.492
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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