Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG19859.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EHG20361.1
Hypothetical protein.
     
  0.837
EHG21923.1
Hypothetical protein.
  
     0.680
EHG20720.1
Hypothetical protein.
  
     0.680
EHG19858.1
Hypothetical protein.
       0.648
EHG21682.1
Hypothetical protein.
  
     0.580
EHG22642.1
Hypothetical protein.
 
 0.560
EHG21094.1
Hypothetical protein.
  
     0.509
EHG20354.1
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.487
EHG19860.1
Hypothetical protein.
       0.480
EHG21413.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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