Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG19882.1Hypothetical protein. (639 aa)    
Predicted Functional Partners:
EHG19883.1
Hypothetical protein.
 
     0.953
EHG19887.1
Hypothetical protein.
 
  
 0.952
EHG19889.1
Hypothetical protein.
 
  
 0.943
lpxD
Hypothetical protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.918
EHG19879.1
Hypothetical protein.
 
   
 0.875
EHG19807.1
Hypothetical protein.
 
  
 0.872
EHG19878.1
Hypothetical protein.
 
   
 0.859
EHG22627.1
RIP metalloprotease RseP.
 
  
 0.846
EHG21628.1
Hypothetical protein.
  
  
 0.844
EHG19885.1
Hypothetical protein.
 
     0.833
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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