STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG19882.1Hypothetical protein. (639 aa)    
Predicted Functional Partners:
EHG19887.1
Hypothetical protein.
 
  
 0.953
EHG19883.1
Hypothetical protein.
 
     0.932
EHG19889.1
Hypothetical protein.
 
  
 0.920
EHG19807.1
Hypothetical protein.
 
    0.890
lpxD
Hypothetical protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.880
EHG19879.1
Hypothetical protein.
 
   
 0.870
EHG19878.1
Hypothetical protein.
 
   
 0.852
EHG22627.1
RIP metalloprotease RseP.
 
  
 0.840
EHG19885.1
Hypothetical protein.
 
     0.832
EHG21628.1
Hypothetical protein.
  
  
 0.829
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.