Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG18997.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
EHG22478.1
Hypothetical protein.
 
  
 0.715
EHG20436.1
Hypothetical protein.
 
  
 0.696
EHG18906.1
Rubredoxin.
 
  
 0.677
EHG21902.1
Pyruvate-flavodoxin oxidoreductase.
 
    0.581
EHG21120.1
Hypothetical protein.
   
    0.544
EHG21121.1
Hypothetical protein.
   
    0.544
EHG18998.1
Hypothetical protein.
       0.456
EHG21883.1
precorrin-3B C17-methyltransferase.
  
  
 0.442
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
   
 0.402
Your Current Organism:
Selenomonas infelix
NCBI taxonomy Id: 679201
Other names: S. infelix ATCC 43532, Selenomonas infelix ATCC 43532, Selenomonas infelix str. ATCC 43532, Selenomonas infelix strain ATCC 43532
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