STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000832015_00029Unannotated protein. (359 aa)    
Predicted Functional Partners:
GCA_000832015_03423
Unannotated protein.
 
 
 0.976
GCA_000832015_02125
Unannotated protein.
  
  
 0.879
GCA_000832015_00620
Unannotated protein.
  
  
 0.864
GCA_000832015_00619
Unannotated protein.
  
  
  0.858
GCA_000832015_01233
Unannotated protein.
 
   
 0.837
GCA_000832015_02128
Unannotated protein.
     
  0.834
GCA_000832015_00085
Unannotated protein.
     
 0.831
GCA_000832015_02751
Unannotated protein.
     
 0.828
GCA_000832015_01677
Unannotated protein.
  
  
  0.812
GCA_000832015_02842
Unannotated protein.
 
   
  0.798
Your Current Organism:
Gilvimarinus agarilyticus
NCBI taxonomy Id: 679259
Other names: G. agarilyticus, KCTC 23325, Marinimicrobium sp. M5c, NCAIM B 02425, strain M5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.