STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000832015_00734Unannotated protein. (306 aa)    
Predicted Functional Partners:
GCA_000832015_01468
Unannotated protein.
  
 0.880
GCA_000832015_00733
Unannotated protein.
 
   
 0.825
GCA_000832015_00735
Unannotated protein.
 
   
 0.679
GCA_000832015_01434
Unannotated protein.
     
 0.656
GCA_000832015_01467
Unannotated protein.
  
 0.603
GCA_000832015_03602
Unannotated protein.
  
 
  0.503
GCA_000832015_01636
Unannotated protein.
 
      0.451
GCA_000832015_00732
Unannotated protein.
       0.420
GCA_000832015_03546
Unannotated protein.
   
 
  0.419
GCA_000832015_03597
Unannotated protein.
   
 
  0.419
Your Current Organism:
Gilvimarinus agarilyticus
NCBI taxonomy Id: 679259
Other names: G. agarilyticus, KCTC 23325, Marinimicrobium sp. M5c, NCAIM B 02425, strain M5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.