STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000832015_00814Unannotated protein. (332 aa)    
Predicted Functional Partners:
GCA_000832015_03486
Unannotated protein.
    
 
 0.888
GCA_000832015_01228
Unannotated protein.
 
 
 
 0.792
GCA_000832015_03363
Unannotated protein.
    
   0.533
GCA_000832015_02773
Unannotated protein.
    
 0.521
GCA_000832015_00282
Unannotated protein.
    
 0.519
GCA_000832015_02396
Unannotated protein.
    
   0.499
GCA_000832015_03419
Unannotated protein.
 
 
 0.487
GCA_000832015_00733
Unannotated protein.
 
 
 
 0.485
GCA_000832015_01721
Unannotated protein.
    
   0.475
GCA_000832015_02923
Unannotated protein.
    
   0.475
Your Current Organism:
Gilvimarinus agarilyticus
NCBI taxonomy Id: 679259
Other names: G. agarilyticus, KCTC 23325, Marinimicrobium sp. M5c, NCAIM B 02425, strain M5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.