STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000832015_01318Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_000832015_01317
Unannotated protein.
 
     0.862
GCA_000832015_01319
Unannotated protein.
 
     0.857
GCA_000832015_01320
Unannotated protein.
 
     0.853
GCA_000832015_01065
Unannotated protein.
    
   0.823
GCA_000832015_01905
Unannotated protein.
 
     0.770
GCA_000832015_03589
Unannotated protein.
 
     0.766
GCA_000832015_00209
Unannotated protein.
  
     0.762
GCA_000832015_01904
Unannotated protein.
  
     0.762
GCA_000832015_00208
Unannotated protein.
 
     0.746
GCA_000832015_01475
Unannotated protein.
  
     0.742
Your Current Organism:
Gilvimarinus agarilyticus
NCBI taxonomy Id: 679259
Other names: G. agarilyticus, KCTC 23325, Marinimicrobium sp. M5c, NCAIM B 02425, strain M5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.