STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000832015_01549Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_000832015_01548
Unannotated protein.
   
 0.993
GCA_000832015_01550
Unannotated protein.
 
  
 0.977
GCA_000832015_01551
Unannotated protein.
 
     0.907
GCA_000832015_02477
Unannotated protein.
 
    0.663
GCA_000832015_03530
Unannotated protein.
   
    0.544
GCA_000832015_00769
Unannotated protein.
 
     0.541
GCA_000832015_02174
Unannotated protein.
 
     0.536
GCA_000832015_01577
Unannotated protein.
   
    0.511
GCA_000832015_00363
Unannotated protein.
  
    0.475
GCA_000832015_02172
Unannotated protein.
  
     0.418
Your Current Organism:
Gilvimarinus agarilyticus
NCBI taxonomy Id: 679259
Other names: G. agarilyticus, KCTC 23325, Marinimicrobium sp. M5c, NCAIM B 02425, strain M5c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.