STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW93564.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
AOW93563.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.981
AOW95040.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
AOW92071.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
AOW92477.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.841
AOW93179.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.841
AOW94369.1
Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.838
AOW93436.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.776
BFN03_14415
Transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
0.712
AOW91837.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.471
Your Current Organism:
Rhodococcus sp. WMMA185
NCBI taxonomy Id: 679318
Other names: R. sp. WMMA185
Server load: low (26%) [HD]