STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMU03020Putative TonB-dependent receptor protein; evidence=ISS. (825 aa)    
Predicted Functional Partners:
CeuE
Periplasmic iron-binding protein Iron(III) ABC transporter CeuE; evidence=ISS.
 
  
 0.788
FecA
Putative TonB-dependent Iron(III) dicitrate receptor; evidence=ISS; db_xref=smarcescens:SMA1561; date=20070321; method=automatic:top fasta hit.
  
   
 0.580
FecD
Putative iron compound ABC transporter, permease FecD; evidence=ISS; db_xref=pmirabilis:PMI2676; date=20070321; method=automatic:reciprocal fasta; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.563
tonB2
Putative tonB transport protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.524
FecE
ABC transporter ATP-binding protein FecE; evidence=ISS; db_xref=ecarotovora_atroseptica:ECA3094; date=20070321; method=automatic:reciprocal fasta.
 
  
 0.472
TonB-family
Putative siderophore-mediated iron transport protein; evidence=ISS.
   
   0.406
HMU14010
Putative hypothetical protein; evidence=ISS.
   
   0.406
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.