STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhNADP-specific glutamate dehydrogenase; evidence=ISS; db_xref=suberis:SUB0762; date=20070321; method=automatic:reciprocal fasta; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (451 aa)    
Predicted Functional Partners:
putA
Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 0.958
glnA
Glutamine synthetase; evidence=ISS; db_xref=cjejuni:Cj0699c; date=20070321; method=automatic:reciprocal fasta; Belongs to the glutamine synthetase family.
  
 
 0.928
argJ
Putative arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.911
aspB
Aspartate aminotransferase; evidence=ISS; db_xref=cjejuni:Cj0762c; date=20070321; method=automatic:reciprocal fasta.
   
 
 0.909
HMU08840
Putative periplasmic cytochrome C nitrite reductase; evidence=ISS; db_xref=cjejuni:Cj1357c; date=20070321; method=automatic:reciprocal fasta; Belongs to the cytochrome c-552 family.
     
 0.905
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
    
  0.903
HMU11490
Putative Acetyltransferase, gnat family; evidence=ISS.
   
 
  0.900
gltA
Citrate synthase; evidence=ISS; db_xref=cjejuni:Cj1682c; date=20070321; method=automatic:reciprocal fasta; Belongs to the citrate synthase family.
   
 0.891
ggt
Gamma-glutamyltranspeptidase precursor; evidence=ISS; db_xref=senteritidisPT4:SEN3374; date=20070321; method=automatic:reciprocal fasta.
   
 
 0.823
gltX2
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
    
 0.821
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.