STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; evidence=ISS; db_xref=nmeningitidis_serogroupC_strainFAM18:NMC1329; date=20070321; method=automatic:reciprocal fasta; Belongs to the bacterial glucokinase family. (334 aa)    
Predicted Functional Partners:
pgi1
Glucose-6-phosphate isomerase; evidence=ISS; db_xref=nmeningitidis_serogroupC_strainFAM18:NMC1326; date=20070321; method=automatic:reciprocal fasta; Belongs to the GPI family.
    
 0.985
zwf
Glucose 6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.955
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
  
 0.940
eda
7 KHG/KDPG aldolase; Unknown EC_number=; ; evidence=ISS; db_xref=styphimuriumDT104:SDT1895; date=20070321; method=automatic:reciprocal fasta.
  
 
 0.933
HMU13960
Putative phospho-sugar mutase; evidence=ISS; db_xref=cjejuni:Cj1407c; date=20070321; method=automatic:reciprocal fasta.
     
 0.923
tkt
Transketolase; evidence=ISS; db_xref=cjejuni:Cj1645; date=20070321; method=automatic:reciprocal fasta; Belongs to the transketolase family.
    
 0.862
HMU05000
Putative transmembrane glucose/galactose transporter; evidence=ISS; db_xref=nmeningitidis_serogroupA_strainZ2491:NMA0714; date=20070321; method=automatic:reciprocal fasta.
 
   
 0.852
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
    
 0.851
fba
Putative fructose-1,6-bisphosphate aldolase, Fba; evidence=IEA; db_xref=cbotulinum:CBO0193; date=20070321; method=automatic:reciprocal fasta.
     
 0.842
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.820
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.