STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMU05520Putative response regulator; evidence=ISS; db_xref=smarcescens:SMA4549; date=20070321; method=automatic:reciprocal fasta; Belongs to the sulfur carrier protein TusA family. (79 aa)    
Predicted Functional Partners:
yedE
Putative membrane protein; evidence=ISS; db_xref=sbongori:SBG1793; date=20070321; method=automatic:reciprocal fasta.
 
  
 0.991
HMU11060
Putative cysteine desulfurase (nifS protein homolog); evidence=ISS; db_xref=cjejuni:Cj0240c; date=20070321; method=automatic:reciprocal fasta.
   
 
 0.793
HMU03300
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj1449c; date=20070321; method=automatic:reciprocal fasta.
  
     0.480
HMU05540
Putative hydrolase; evidence=ISS; db_xref=cjejuni:Cj0809c; date=20070321; method=automatic:reciprocal fasta.
  
    0.416
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.