STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
HMU07160Putative hypothetical protein; Homologous to H. pylori HP0114 gene product involved in flagellar glycosylation. (629 aa)    
Predicted Functional Partners:
flaB
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   0.864
flgL
Homologous to H. pylori and H. hepaticus hook-associated protein 3.
 
 
 0.799
HMU07870
Putative hypothetical protein; evidence=ISS.
  
     0.769
HMU01720
Putative septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
     0.750
HMU04770
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj0530; date=20070321; method=automatic:top fasta hit.
  
     0.739
HMU07180
Putative lipoprotein; evidence=ISS; db_xref=cjejuni:Cj0946; date=20070321; method=automatic:top fasta hit.
 
     0.731
fliD
Putative flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
     0.705
fliW2
Putative flagellar assembly factor FliW 1; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.703
HMU02030
Putative periplasmic protein; evidence=ISS; db_xref=cjejuni:Cj1496c; date=20070321; method=automatic:reciprocal fasta.
  
     0.694
HMU05080
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj1009c; date=20070321; method=automatic:reciprocal fasta.
  
     0.692
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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