STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMU07310Possible restriction /modification enzyme; evidence=ISS; db_xref=cjejuni:Cj0690c; date=20070321; method=automatic:reciprocal fasta. (1286 aa)    
Predicted Functional Partners:
HMU04070
Putative type I restriction-modification system S protein; evidence=ISS; db_xref=sequi:SEQ1976; date=20070321; method=automatic:top fasta hit.
   
   0.661
HMU08160
Putative type I restriction-modification system S protein; evidence=ISS; db_xref=sequi:SEQ1976; date=20070321; method=automatic:top fasta hit.
   
   0.661
HMU08290
Type I restriction-modification methylase; evidence=ISS; db_xref=sbongori:SBG0268; date=20070321; method=automatic:reciprocal fasta.
   
   0.661
HMU13750
Putative type I restriction-modification system S protein; evidence=ISS; db_xref=sequi:SEQ1976; date=20070321; method=automatic:top fasta hit.
   
   0.661
HMU08170
Type I restriction-modification system, restriction enzyme; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.580
HMU07300
Unnamed protein product; evidence=IEA.
       0.518
HMU12080
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj1602; date=20070321; method=automatic:reciprocal fasta.
 
   0.475
HMU07320
Cholesterol alpha-glucosyltransferase; PMID: 16978585; ; evidence=ISS; db_xref=Cms:CMS1578; date=20070321; method=automatic:top fasta hit.
  
    0.456
HMU00640
Putative type II restriction/-modification system protein; evidence=ISS; db_xref=suberis:SUB0779; date=20070321; method=automatic:reciprocal fasta.
  
   
0.448
HMU11990
Putative type IIS restriction /modification enzyme, N-terminal half; evidence=ISS; db_xref=cjejuni:Cj0031; date=20070321; method=automatic:top fasta hit.
  
   
0.443
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.